Publications 2001

Books 2001

E. Boeker, R. van Grondelle
Environmental science: Physical principles and applications
John Wiley & Sons Ltd, Chichester, UK (ISBN 0-471-49577-8), 2001

 

Dissertations 2001

Claudiu C. Gradinaru
Ultrafast dynamics of chlorophylls and carotenoids in antenna complexes from plants and bacteria. Linking energy transfer kinetics to structural properties
PhD Advisors prof. dr. R. van Grondelle and dr. H. van Amerongen
Vrije Universiteit Amsterdam, 1 March 2001, PhD Thesis

Stefania S. Lampoura
Dynamics in biological samples and J-aggregates explored by linear and nonlinear optical spectroscopy
PhD Advisors prof. dr. R. van Grondelle and prof. dr. K. Duppen
Vrije Universiteit Amsterdam, 18 October 2001, PhD Thesis

 

Publications 2001

H. van Amerongen, R. van Grondelle
Understanding the energy transfer function of LHCII, the major light-harvesting complex of green plants
J. Phys. Chem. B 105, 2001, p. 604-617 [pdf]

H. van Amerongen, J.P. Dekker, R. van Grondelle
Energy transfer in photosystem II is slow
PS2001 Proceedings: 12th International Congress on Photosynthesis, CSIRO Publishing, Melbourne, Australia, 2001, p. S31-015 [pdf]


V. Barzda, C.J. de Grauw, J. Vroom, F.J. Kleima, R. van Grondelle, H. van Amerongen, H.C. Gerritsen
Fluorescence lifetime heterogeneity in aggregates of LHCII revealed by time-resolved microscopy
Biophys. J. 81, 2001, p. 538-546 [pdf]

V. Barzda, V. Gulbinas, R. Kananavicius, H. van Amerongen, R. van Grondelle, L. Valkunas
Singlet-singlet annihilation kinetics in aggregates and trimers of LHCII
Biophys. J. 80, 2001, p. 2409-2421 [pdf]

P.A.W. van den Berg, S.B. Mulrooney, B. Gobets, I.H.M. van Stokkum, A. van Hoek, C.H. Williams, A.J.W.G. Visser
Exploring the conformational equilibrium of E. coli thioredoxin reductase: Characterization of two catalytically important states by ultrafast flavin fluorescence spectroscopy
Protein Sci. 10, 2001, p. 2037-2049

E.J. Boekema, P.E. Jensen, E. Schlodder, J.F.L. van Breemen, H. van Roon, H.V. Scheller, J.P. Dekker
Green plant photosystem I binds light-harvesting complex I on one side of the complex
Biochemistry 40, 2001, p. 1029-1036 [pdf]

B. Gobets, I.H.M. van Stokkum, M. Rögner, J. Kruip, E. Schlodder, N.V. Karapetyan, J.P. Dekker, R. van Grondelle
Time-resolved fluorescence emission measurements of photosystem I particles of various cyanobacteria
A unified compartmental model

Biophys. J. 81, 2001, p. 407-424 [pdf]

B. Gobets, J.T.M. Kennis, J.A. Ihalainen, M. Brazzoli, R. Croce, I.H.M. van Stokkum, R. Bassi, J.P. Dekker, H. van Amerongen, G.R. Fleming, R. van Grondelle
Excitation energy transfer in dimeric light-harvesting complex I: a combined streak-camera/fluorescence upconversion study
J. Phys. Chem. B 105, 2001, p. 10132-10139 [pdf]

B. Gobets, R. van Grondelle
Energy transfer and trapping in photosystem I
Biochim. Biophys. Acta 1507, 2001, p. 80-99 empty[pdf]

B. Gobets, I.H.M. van Stokkum, M. Rögner, J. Kruip, E. Schlodder, N.V. Karapetyan, J.P. Dekker, R. van Grondelle
Fluorescence kinetics of Photosystem I core particles with different low energy chlorophyll content: A unified quantitative analysis
PS2001 Proceedings: 12th International Congress on Photosynthesis, CSIRO Publishing, Melbourne, Australia, 2001, p. S6-008 [pdf]


C.C. Gradinaru, J.T.M. Kennis, E. Papagiannakis, I.H.M. van Stokkum, R.J. Cogdell, G.R. Fleming, R.A. Niederman, R. van Grondelle
An unusual pathway of excitation energy deactivation in carotenoids: Singlet-to-triplet conversion on an ultrafast timescale in a photosynthetic antenna
Proc. Natl. Acad. Sci. USA 98, 2001, p. 2364-2369 [pdf]

R. van Grondelle, V. Novoderezhkin
Dynamics of excitation energy transfer in the LH1 and LH2 light-harvesting complexes of photosynthetic bacteria
Biochemistry 40, 2001, p. 15057-15068 [pdf]

J.A. Ihalainen, P.E. Jensen, A. Haldrup, I.H.M. van Stokkum, R. van Grondelle, H.V. Scheller, J.P. Dekker
Spectroscopic characterization of isolated PSI-200 complexes from plants devoid of the PSI-G, PSI-K, PSI-L and PSI-N subunits
PS2001 Proceedings: 12th International Congress on Photosynthesis, CSIRO Publishing, Melbourne, Australia, 2001, p. S6-013 [pdf]


J.T.M. Kennis, B. Gobets, I.H.M. van Stokkum, J.P. Dekker, R. van Grondelle, G.R. Fleming
Light harvesting by chlorophylls and carotenoids in the photosystem I core complex of Synechococcus elongatus. A fluorescence upconversion study
J. Phys. Chem. B 105, 2001, p. 4485-4494 [pdf]

B.P. Krueger, S.S. Lampoura, I.H.M. van Stokkum, E. Papagiannakis, J.M. Salverda, C.C. Gradinaru, D. Rutkauskas, R.G. Hiller, R. van Grondelle
Energy transfer in the peridinin chlorophyll a protein of Amphidinium carterae studied by polarized transient absorption and target analysis
Biophys. J. 80, 2001, p. 2843-2855 [pdf]

O.F.A. Larsen, I.H.M. van Stokkum, B. Gobets, R. van Grondelle, H. van Amerongen
Probing the structure and dynamics of a DNA hairpin by ultrafast quenching and fluorescence depolarization
Biophys. J. 81, 2001, p. 1115-1126 [pdf]

A. Pandit, R.W. Visschers, I.H.M. van Stokkum, R. Kraayenhof, R. van Grondelle
Oligomerization of light-harvesting I antenna peptides of Rhodospirillum rubrum
Biochemistry 40, 2001, p. 12913-12924 [pdf]

E. Papagiannakis, J.T.M. Kennis, I.H.M. van Stokkum, R.J. Cogdell, R. van Grondelle
A new carotenoid-to-BChl energy transfer pathway in photosynthetic light harvesting
PS2001 Proceedings: 12th International Congress on Photosynthesis, CSIRO Publishing, Melbourne, Australia, 2001, p. S1-010 [pdf]


J.M. Salverda, R. van Grondelle
Primary processes in photosynthesis studied by femtosecond nonlinear spectroscopy
Femtochemistry (F.C. De Schryver, S. De Feyter and G. Schweitzer, eds.), Wiley-VCH, Weinheim, Germany, 2001, p. 399-415

D. Schneider, S.-O. Wenk, S. Berry, U. Boronowsky, C. Jäger, F.L. de Weerd, J.P. Dekker, M. Rögner
Function of pigments and subunits in cytochrome b6f complex of Synechocystis 6803
PS2001 Proceedings: 12th International Congress on Photosynthesis, CSIRO Publishing, Melbourne, Australia, 2001, p. S11-012 [pdf]


F.L. de Weerd, I.H.M. van Stokkum, J.P. Dekker, H. van Amerongen, R. van Grondelle
Energy transfer in the CP43 and CP47 complexes of photosystem II
PS2001 Proceedings: 12th International Congress on Photosynthesis, CSIRO Publishing, Melbourne, Australia, 2001, p. S31-014 [pdf]


A.E. Yakushevska, P.E. Jensen, W. Keegstra, H. van Roon, H.V. Scheller, E.J. Boekema, J.P. Dekker
Supermolecular organization of photosystem II and its associated light-harvesting antenna in Arabidopsis thaliana
Eur. J. Biochem. 268, 2001, p. 6020-6028 [pdf]

A.E. Yakushevska, A.V. Ruban, P.E. Jensen, H. van Roon, K.K. Niyogi, P. Horton, J.P. Dekker, E.J. Boekema
Supermolecular organization of photosystem II and its associated light-harvesting antenna in the wild-type and npq4 mutant of Arabidopsis thaliana
PS2001 Proceedings: 12th International Congress on Photosynthesis, CSIRO Publishing, Melbourne, Australia, 2001, p. S5-006 [pdf]


M.M. Yatskou, R.B.M. Koehorst, A. van Hoek, H. Donker, T.J. Schaafsma, B. Gobets, I.H.M. van Stokkum, R. van Grondelle
Spectroscopic properties of a self-assembled zinc porphyrin tetramer II. Time-resolved fluorescence spectroscopy
J. Phys. Chem. A 105, 2001, p. 11432-11440 [pdf]